Human MicroRNA target prediction via multi-hypotheses learning

M Mohebbi, L Ding, RL Malmberg… - Journal of Computational …, 2021 - liebertpub.com
… RNAfold prediction for the purpose of microRNA targeting and include information about in
vivo process of microRNA target binding, we tuned RNAfold to predict … of microRNA targeting. …

Machine learning techniques in exploring microRNA gene discovery, targets, and functions

S Singh, RG Benton, A Singh, A Singh - Bioinformatics in MicroRNA …, 2017 - Springer
… artificial neural networks and support vector machines. In addition… problem by using an SVM
classifier in their miTarget. … that use a combination of two or more miRNA target predicting

Machine Learning Based Methods and Best Practices of microRNA-Target Prediction and Validation

N Nath, S Simm - Systems Biology of MicroRNAs in Cancer, 2022 - Springer
… Timeline for ML-based miRNA target prediction tools. The … 2006 to 2020 categorized in
support vector machine (red), random … , miTarget is trained on 398 positive meaningful miRNA–…

[PDF][PDF] THE COMPUTATIONAL METHODS FOR BK POLYOMAVIRUS MICRORNA TARGET IDENTIFICATIONS ON A HUMAN GENE

SG Das, A Datta - 2017 - rjlbpcs.com
… a support vector machine (SVM) classifier, which was used for filtering the miRNAs targets.
We … and widely used in miRNA target prediction such as HomoTarget, miTarget, MiRTif, MTar, …

mirDIP 4.1—integrative database of human microRNA target predictions

T Tokar, C Pastrello, AEM Rossos… - Nucleic acids …, 2018 - academic.oup.com
… Accurate identification of miRNA target genes has been a focus of computational biology for
… resources dedicated to predict which genes are targeted by particular miRNAs. Since 2006, …

TEC-miTarget: enhancing microRNA target prediction based on deep learning of ribonucleic acid sequences

T Yang, Y Wang, Y He - BMC bioinformatics, 2024 - Springer
… In the present study, we introduced a novel miRNA target prediction model called TEC-miTarget,
which leverages the power of the transformer encoder and CNNs. Based on deep …

[PDF][PDF] Micro GS finder: Finding miRNA target for gene silencing, using a support vector machine

SG Das, HJ Chakraborty, A Datta - 2018 - thepharmajournal.com
… for improving the miRNA target prediction by utilizing … can train Support Vector Machines
(SVM) and predict miRNAmiRNA target prediction such as Homo Target [11], miTarget […

Multi-task support vector machines for feature selection with shared knowledge discovery

S Wang, X Chang, X Li, QZ Sheng, W Chen - Signal Processing, 2016 - Elsevier
… Also, in [11], features are ranked and selected to improve the performance of the SVM
classifier-based system, miTarget, which predicts miRNA target gene. In [12], a semi-supervised …

Fuzzy based algorithms to predict MicroRNA regulated protein interaction pathways and ranking estimation in Arabidopsis thaliana

P Manikandan, D Ramyachitra, R Nandhini - Gene, 2019 - Elsevier
prediction scores is used to identify the microRNA target … are available for the prediction of
miRNA regulated protein … the existing algorithms like Support Vector Machine, Neural Network…

miRNAs target databases: developmental methods and target identification techniques with functional annotations

NK Singh - Cellular and Molecular Life Sciences, 2017 - Springer
… In this paper, the different microRNA target databases and their … miRNA target identified by
various methods such as Ab-initio, machine learning (support vector machine (SVM), genetic